dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003208_24|CGC3
Gene ID: MGYG000003208_01680
Location and strand information: 57211 - 58743 (-)
Family: 2.A.50.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003208_24|CGC3
Gene ID: MGYG000003208_01681
Location and strand information: 58940 - 60049 (-)
Family: PL5_1|PL5
Protein type: CAZyme
Protein description: Alginate lyase
Protein isoelectric point: 8.7056
Protein molecular weight: 41833.52
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003208_24|CGC3
Gene ID: MGYG000003208_01682
Location and strand information: 60058 - 61506 (-)
Family: null
Protein type: null
Protein description: Alginate biosynthesis protein AlgX

Gene clsuter ID: MGYG000003208_24|CGC3
Gene ID: MGYG000003208_01683
Location and strand information: 61518 - 63071 (-)
Family: null
Protein type: null
Protein description: Mannuronan C5-epimerase

Gene clsuter ID: MGYG000003208_24|CGC3
Gene ID: MGYG000003208_01684
Location and strand information: 63086 - 64573 (-)
Family: 1.B.13.1.1
Protein type: TC
Protein description: Alginate production protein AlgE

Gene clsuter ID: MGYG000003208_24|CGC3
Gene ID: MGYG000003208_01685
Location and strand information: 64570 - 66066 (-)
Family: null
Protein type: null
Protein description: Alginate biosynthesis protein AlgK

Gene clsuter ID: MGYG000003208_24|CGC3
Gene ID: MGYG000003208_01686
Location and strand information: 66081 - 67247 (-)
Family: null
Protein type: null
Protein description: Mannuronan synthase

Gene clsuter ID: MGYG000003208_24|CGC3
Gene ID: MGYG000003208_01687
Location and strand information: 67284 - 68765 (-)
Family: GT2
Protein type: CAZyme
Protein description: Mannuronan synthase
Protein isoelectric point: 10.3861
Protein molecular weight: 55878.58
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003208_24|CGC3
Gene ID: MGYG000003208_01688
Location and strand information: 68849 - 70165 (-)
Family: null
Protein type: null
Protein description: GDP-mannose 6-dehydrogenase

Gene clsuter ID: MGYG000003208_24|CGC3
Gene ID: MGYG000003208_01689
Location and strand information: 71068 - 71847 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003208_24|CGC3
Gene ID: MGYG000003208_01690
Location and strand information: 72160 - 74499 (+)
Family: 3.A.23.1.1
Protein type: TC
Protein description: Actin cross-linking toxin VgrG1

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is alginate download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003208_01680	hypothetical protein	TC	57211	58743	-	2.A.50.2.1
MGYG000003208_01681	Alginate lyase	CAZyme	58940	60049	-	PL5_1\| PL5
MGYG000003208_01682	Alginate biosynthesis protein AlgX	null	60058	61506	-	ALGX\| CBM_26
MGYG000003208_01683	Mannuronan C5-epimerase	null	61518	63071	-	NosD
MGYG000003208_01684	Alginate production protein AlgE	TC	63086	64573	-	1.B.13.1.1
MGYG000003208_01685	Alginate biosynthesis protein AlgK	null	64570	66066	-	No domain
MGYG000003208_01686	Mannuronan synthase	null	66081	67247	-	PilZ\| HlyD_3
MGYG000003208_01687	Mannuronan synthase	CAZyme	67284	68765	-	GT2
MGYG000003208_01688	GDP-mannose 6-dehydrogenase	null	68849	70165	-	UDPG_MGDP_dh_N\| UDPG_MGDP_dh\| UDPG_MGDP_dh_C
MGYG000003208_01689	hypothetical protein	null	71068	71847	-	H2O2_YaaD
MGYG000003208_01690	Actin cross-linking toxin VgrG1	TC	72160	74499	+	3.A.23.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature